Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ParpbpQ6IRT3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.92□□□□□ -0.5
ParpbpQ6IRT3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ParpbpQ6IRT3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ParpbpQ6IRT3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ParpbpQ6IRT3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Gm16177-201ENSMUST00000120728 718 ntBASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Gm1335-201ENSMUST00000121653 386 ntBASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ParpbpQ6IRT3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm7029-201ENSMUST00000173226 450 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm37042-201ENSMUST00000193816 581 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm19163-201ENSMUST00000223313 780 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm10268-201ENSMUST00000085340 555 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ParpbpQ6IRT3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.9□□□□□ -0.51
ParpbpQ6IRT3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ParpbpQ6IRT3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms