Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VcanQ62059 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.55□□□□□ -0.56
VcanQ62059 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Gm15566-201ENSMUST00000121130 590 ntBASIC11.55□□□□□ -0.56
VcanQ62059 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.55□□□□□ -0.56
VcanQ62059 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Gm18776-201ENSMUST00000188833 654 ntBASIC11.55□□□□□ -0.56
VcanQ62059 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.55□□□□□ -0.56
VcanQ62059 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
VcanQ62059 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
VcanQ62059 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VcanQ62059 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm25053-201ENSMUST00000103982 133 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm25922-201ENSMUST00000104281 130 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm24679-201ENSMUST00000158762 111 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm25053-202ENSMUST00000199731 132 ntBASIC11.54□□□□□ -0.56
VcanQ62059 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VcanQ62059 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm11560-201ENSMUST00000117567 948 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm18801-201ENSMUST00000186616 536 ntBASIC11.54□□□□□ -0.56
VcanQ62059 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
VcanQ62059 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
VcanQ62059 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VcanQ62059 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VcanQ62059 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
VcanQ62059 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm12684-201ENSMUST00000118675 999 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.54□□□□□ -0.56
VcanQ62059 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.54□□□□□ -0.56
VcanQ62059 Gm3551-201ENSMUST00000190750 664 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.54□□□□□ -0.56
VcanQ62059 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Gm6304-201ENSMUST00000096579 447 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.54□□□□□ -0.56
VcanQ62059 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
VcanQ62059 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VcanQ62059 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
VcanQ62059 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms