Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Ctr9Q62018 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.95□□□□□ -0.02
Ctr9Q62018 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.95□□□□□ -0.02
Ctr9Q62018 Gm25214-201ENSMUST00000104573 129 ntBASIC14.95□□□□□ -0.02
Ctr9Q62018 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.95□□□□□ -0.02
Ctr9Q62018 Gm11222-201ENSMUST00000119005 738 ntBASIC14.95□□□□□ -0.02
Ctr9Q62018 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ctr9Q62018 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.95□□□□□ -0.02
Ctr9Q62018 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Gm30285-201ENSMUST00000214614 422 ntBASIC14.95□□□□□ -0.02
Ctr9Q62018 Gm45925-201ENSMUST00000218882 744 ntBASIC14.95□□□□□ -0.02
Ctr9Q62018 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ctr9Q62018 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ctr9Q62018 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.95□□□□□ -0.02
Ctr9Q62018 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ctr9Q62018 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.94□□□□□ -0.02
Ctr9Q62018 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.94□□□□□ -0.02
Ctr9Q62018 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.94□□□□□ -0.02
Ctr9Q62018 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ctr9Q62018 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctr9Q62018 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.93□□□□□ -0.02
Ctr9Q62018 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm12058-201ENSMUST00000118614 437 ntBASIC14.93□□□□□ -0.02
Ctr9Q62018 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm8018-201ENSMUST00000173536 789 ntBASIC14.93□□□□□ -0.02
Ctr9Q62018 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Ctr9Q62018 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ctr9Q62018 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctr9Q62018 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms