Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox17Q61473 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox17Q61473 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox17Q61473 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox17Q61473 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox17Q61473 Gm29667-201ENSMUST00000190817 490 ntBASIC11.85□□□□□ -0.51
Sox17Q61473 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.85□□□□□ -0.51
Sox17Q61473 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox17Q61473 Gm6458-201ENSMUST00000211573 635 ntBASIC11.85□□□□□ -0.51
Sox17Q61473 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.85□□□□□ -0.51
Sox17Q61473 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.85□□□□□ -0.51
Sox17Q61473 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Gm20445-201ENSMUST00000061905 565 ntBASIC11.85□□□□□ -0.51
Sox17Q61473 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Sox17Q61473 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox17Q61473 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sox17Q61473 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.84□□□□□ -0.51
Sox17Q61473 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Sox17Q61473 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.84□□□□□ -0.51
Sox17Q61473 Gm15487-201ENSMUST00000122373 465 ntBASIC11.84□□□□□ -0.51
Sox17Q61473 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.84□□□□□ -0.51
Sox17Q61473 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.84□□□□□ -0.51
Sox17Q61473 Gm19184-201ENSMUST00000196798 928 ntBASIC11.84□□□□□ -0.51
Sox17Q61473 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.84□□□□□ -0.51
Sox17Q61473 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sox17Q61473 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox17Q61473 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Sox17Q61473 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.83□□□□□ -0.51
Sox17Q61473 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sox17Q61473 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.83□□□□□ -0.51
Sox17Q61473 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox17Q61473 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sox17Q61473 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox17Q61473 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms