Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.16□□□□□ -0.46
ClpbQ60649 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ClpbQ60649 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.16□□□□□ -0.46
ClpbQ60649 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.16□□□□□ -0.46
ClpbQ60649 Gm37008-201ENSMUST00000195712 319 ntBASIC12.16□□□□□ -0.46
ClpbQ60649 Gm4768-201ENSMUST00000206199 686 ntBASIC12.16□□□□□ -0.46
ClpbQ60649 Gm45880-201ENSMUST00000213041 853 ntBASIC12.16□□□□□ -0.46
ClpbQ60649 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Gm19163-201ENSMUST00000223313 780 ntBASIC12.16□□□□□ -0.46
ClpbQ60649 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ClpbQ60649 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.16□□□□□ -0.46
ClpbQ60649 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.16□□□□□ -0.46
ClpbQ60649 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClpbQ60649 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ClpbQ60649 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
ClpbQ60649 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm23931-201ENSMUST00000103842 109 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
ClpbQ60649 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.15□□□□□ -0.46
ClpbQ60649 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm16379-201ENSMUST00000161469 348 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 Gm25927-201ENSMUST00000175058 117 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm8762-201ENSMUST00000193486 339 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.15□□□□□ -0.46
ClpbQ60649 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ClpbQ60649 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ClpbQ60649 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.15□□□□□ -0.46
ClpbQ60649 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClpbQ60649 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ClpbQ60649 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ClpbQ60649 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ClpbQ60649 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ClpbQ60649 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ClpbQ60649 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms