Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm38317-201ENSMUST00000195564 343 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm5363-201ENSMUST00000211927 938 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Daam2-202ENSMUST00000224595 1926 ntBASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Gm23270-201ENSMUST00000104055 131 ntBASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Gm11930-201ENSMUST00000117788 190 ntBASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shroom1Q5SX79 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shroom1Q5SX79 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Gm12058-201ENSMUST00000118614 437 ntBASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Gm14017-201ENSMUST00000121934 386 ntBASIC13.45□□□□□ -0.26
Shroom1Q5SX79 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Gm15276-201ENSMUST00000145953 498 ntBASIC13.45□□□□□ -0.26
Shroom1Q5SX79 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms