Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.43□□□□□ -0.42
Pfdn4Q3UWL8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Gm22189-201ENSMUST00000103822 86 ntBASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Gm13813-201ENSMUST00000120998 787 ntBASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn4Q3UWL8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn4Q3UWL8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms