Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm9630-201ENSMUST00000178304 885 ntBASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.66□□□□□ -0.06
Cdkl5Q3UTQ8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gm16379-201ENSMUST00000161469 348 ntBASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gm8762-201ENSMUST00000193486 339 ntBASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl5Q3UTQ8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.64□□□□□ -0.07
Cdkl5Q3UTQ8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkl5Q3UTQ8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms