Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm11478-201ENSMUST00000117851 599 ntBASIC14.39□□□□□ -0.11
Gm28047Q3US59 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.39□□□□□ -0.11
Gm28047Q3US59 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28047Q3US59 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.38□□□□□ -0.11
Gm28047Q3US59 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm28047Q3US59 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Gm16177-201ENSMUST00000120728 718 ntBASIC14.38□□□□□ -0.11
Gm28047Q3US59 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Gm29127-201ENSMUST00000188304 517 ntBASIC14.38□□□□□ -0.11
Gm28047Q3US59 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm28047Q3US59 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.38□□□□□ -0.11
Gm28047Q3US59 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.38□□□□□ -0.11
Gm28047Q3US59 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.38□□□□□ -0.11
Gm28047Q3US59 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28047Q3US59 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm27682-201ENSMUST00000183930 110 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm7653-201ENSMUST00000214567 508 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm10268-201ENSMUST00000085340 555 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.37□□□□□ -0.11
Gm28047Q3US59 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28047Q3US59 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms