Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gm7561-201ENSMUST00000211203 886 ntBASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm4984-201ENSMUST00000115987 360 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm12363-201ENSMUST00000122250 668 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm26035-201ENSMUST00000083065 308 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.92□□□□□ -0.5
Brf2Q3UAW9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Snord83b-201ENSMUST00000104546 94 ntBASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.91□□□□□ -0.5
Brf2Q3UAW9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms