Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vars2Q3U2A8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm25076-201ENSMUST00000104098 132 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm15626-201ENSMUST00000117478 868 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm12218-201ENSMUST00000117666 399 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm16166-201ENSMUST00000118291 787 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm24398-201ENSMUST00000157870 109 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm45500-201ENSMUST00000211676 803 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vars2Q3U2A8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vars2Q3U2A8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms