Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43aQ3TL54 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm11918-201ENSMUST00000121660 179 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm9002-201ENSMUST00000178437 499 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm27701-201ENSMUST00000184498 110 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm44397-201ENSMUST00000195950 113 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Mir339-201ENSMUST00000083659 96 ntBASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43aQ3TL54 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm12341-201ENSMUST00000119724 503 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Mir7654-201ENSMUST00000185082 70 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm18307-201ENSMUST00000206864 949 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm9908-201ENSMUST00000211534 448 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43aQ3TL54 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms