Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Gm3890-201ENSMUST00000182416 207 ntBASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Gm18827-201ENSMUST00000188341 790 ntBASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc4Q3TCX3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Gm24255-201ENSMUST00000104481 128 ntBASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Gm29199-201ENSMUST00000187766 775 ntBASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Gm7046-201ENSMUST00000221351 977 ntBASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Khdc4Q3TCX3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms