Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Q3KNL4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.42□□□□□ -0.42
Q3KNL4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.42□□□□□ -0.42
Q3KNL4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Q3KNL4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.42□□□□□ -0.42
Q3KNL4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.42□□□□□ -0.42
Q3KNL4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.42□□□□□ -0.42
Q3KNL4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.42□□□□□ -0.42
Q3KNL4 Gm8463-201ENSMUST00000208573 613 ntBASIC12.42□□□□□ -0.42
Q3KNL4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.42□□□□□ -0.42
Q3KNL4 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.42□□□□□ -0.42
Q3KNL4 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.42□□□□□ -0.42
Q3KNL4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Q3KNL4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Q3KNL4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Q3KNL4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Q3KNL4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Q3KNL4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3KNL4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.41□□□□□ -0.42
Q3KNL4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Q3KNL4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Q3KNL4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Gm13612-201ENSMUST00000119276 390 ntBASIC12.41□□□□□ -0.42
Q3KNL4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 Gm8515-201ENSMUST00000194852 576 ntBASIC12.41□□□□□ -0.42
Q3KNL4 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.41□□□□□ -0.42
Q3KNL4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.41□□□□□ -0.42
Q3KNL4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.41□□□□□ -0.42
Q3KNL4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3KNL4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.41□□□□□ -0.42
Q3KNL4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3KNL4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.41□□□□□ -0.42
Q3KNL4 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.41□□□□□ -0.42
Q3KNL4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.4□□□□□ -0.42
Q3KNL4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.4□□□□□ -0.42
Q3KNL4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3KNL4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Q3KNL4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms