Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm34379-201ENSMUST00000195036 290 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm19228-201ENSMUST00000214030 717 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm12314-201ENSMUST00000118104 538 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm11957-201ENSMUST00000118304 779 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm15136-201ENSMUST00000120552 533 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm7815-201ENSMUST00000196104 832 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.25□□□□□ -0.61
Chd8Q09XV5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chd8Q09XV5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Mir8093-201ENSMUST00000185043 137 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms