Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.15□□□□□ -0.46
Hoxc4Q08624 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gzmn-202ENSMUST00000225535 989 ntBASIC12.15□□□□□ -0.46
Hoxc4Q08624 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.15□□□□□ -0.46
Hoxc4Q08624 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc4Q08624 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxc4Q08624 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Hoxc4Q08624 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm25700-201ENSMUST00000177693 110 ntBASIC12.14□□□□□ -0.47
Hoxc4Q08624 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm9230-201ENSMUST00000188228 532 ntBASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm45598-202ENSMUST00000210719 986 ntBASIC12.14□□□□□ -0.47
Hoxc4Q08624 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.14□□□□□ -0.47
Hoxc4Q08624 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc4Q08624 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms