Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tff1Q08423 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.54□□□□□ -0.72
Tff1Q08423 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.53□□□□□ -0.72
Tff1Q08423 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Tff1Q08423 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.53□□□□□ -0.72
Tff1Q08423 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
Tff1Q08423 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.53□□□□□ -0.72
Tff1Q08423 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.53□□□□□ -0.72
Tff1Q08423 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.53□□□□□ -0.72
Tff1Q08423 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.53□□□□□ -0.72
Tff1Q08423 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Gm6091-201ENSMUST00000098307 165 ntBASIC10.53□□□□□ -0.72
Tff1Q08423 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.53□□□□□ -0.72
Tff1Q08423 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Tff1Q08423 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.53□□□□□ -0.72
Tff1Q08423 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tff1Q08423 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tff1Q08423 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tff1Q08423 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tff1Q08423 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tff1Q08423 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.52□□□□□ -0.73
Tff1Q08423 Gm14350-201ENSMUST00000116642 640 ntBASIC10.52□□□□□ -0.73
Tff1Q08423 Gm12928-201ENSMUST00000117115 573 ntBASIC10.52□□□□□ -0.73
Tff1Q08423 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.52□□□□□ -0.73
Tff1Q08423 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.52□□□□□ -0.73
Tff1Q08423 Gm8652-201ENSMUST00000181363 964 ntBASIC10.52□□□□□ -0.73
Tff1Q08423 Gm2495-201ENSMUST00000191160 466 ntBASIC10.52□□□□□ -0.73
Tff1Q08423 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.52□□□□□ -0.73
Tff1Q08423 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms