Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Col9a2Q07643 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.69□□□□□ -0.22
Col9a2Q07643 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col9a2Q07643 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.69□□□□□ -0.22
Col9a2Q07643 Gm8913-201ENSMUST00000209491 641 ntBASIC13.69□□□□□ -0.22
Col9a2Q07643 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.69□□□□□ -0.22
Col9a2Q07643 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col9a2Q07643 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a2Q07643 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Gm23200-201ENSMUST00000104379 132 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 Gm14017-201ENSMUST00000121934 386 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Gm6963-201ENSMUST00000147879 379 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 Rmrp-201ENSMUST00000157463 271 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a2Q07643 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.68□□□□□ -0.22
Col9a2Q07643 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a2Q07643 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a2Q07643 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Col9a2Q07643 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.67□□□□□ -0.22
Col9a2Q07643 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.67□□□□□ -0.22
Col9a2Q07643 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Col9a2Q07643 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.67□□□□□ -0.22
Col9a2Q07643 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.67□□□□□ -0.22
Col9a2Q07643 Mir7032-201ENSMUST00000185154 79 ntBASIC13.67□□□□□ -0.22
Col9a2Q07643 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Gm37666-201ENSMUST00000194110 866 ntBASIC13.67□□□□□ -0.22
Col9a2Q07643 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col9a2Q07643 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col9a2Q07643 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms