Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm17420-201ENSMUST00000164753 153 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm3890-201ENSMUST00000182416 207 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm27572-201ENSMUST00000183702 255 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm38092-201ENSMUST00000195600 653 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm45880-201ENSMUST00000213041 853 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.68□□□□□ -0.54
Col10a1Q05306 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.68□□□□□ -0.54
Col10a1Q05306 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.68□□□□□ -0.54
Col10a1Q05306 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col10a1Q05306 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Col10a1Q05306 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.67□□□□□ -0.54
Col10a1Q05306 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col10a1Q05306 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.67□□□□□ -0.54
Col10a1Q05306 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.67□□□□□ -0.54
Col10a1Q05306 Gm5904-201ENSMUST00000210286 865 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms