Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.34□□□□□ -0.11
GabpaQ00422 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.34□□□□□ -0.11
GabpaQ00422 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.34□□□□□ -0.11
GabpaQ00422 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.34□□□□□ -0.11
GabpaQ00422 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.34□□□□□ -0.11
GabpaQ00422 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Gm5070-201ENSMUST00000177599 862 ntBASIC14.34□□□□□ -0.11
GabpaQ00422 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GabpaQ00422 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.34□□□□□ -0.11
GabpaQ00422 Gm8913-201ENSMUST00000209491 641 ntBASIC14.34□□□□□ -0.11
GabpaQ00422 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GabpaQ00422 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.34□□□□□ -0.11
GabpaQ00422 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.34□□□□□ -0.11
GabpaQ00422 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
GabpaQ00422 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GabpaQ00422 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
GabpaQ00422 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GabpaQ00422 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
GabpaQ00422 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
GabpaQ00422 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GabpaQ00422 Gm14644-201ENSMUST00000116671 647 ntBASIC14.33□□□□□ -0.12
GabpaQ00422 Gm12217-201ENSMUST00000118858 696 ntBASIC14.33□□□□□ -0.12
GabpaQ00422 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GabpaQ00422 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.33□□□□□ -0.12
GabpaQ00422 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.33□□□□□ -0.12
GabpaQ00422 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.33□□□□□ -0.12
GabpaQ00422 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GabpaQ00422 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GabpaQ00422 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GabpaQ00422 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GabpaQ00422 Matn2-206ENSMUST00000228570 2798 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Gm14277-201ENSMUST00000121195 360 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 Rmrp-201ENSMUST00000157463 271 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GabpaQ00422 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GabpaQ00422 Gm25732-201ENSMUST00000175168 60 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 Gm18304-201ENSMUST00000189162 546 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 Gm7003-201ENSMUST00000195089 312 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 Gm18753-201ENSMUST00000201000 566 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.32□□□□□ -0.12
GabpaQ00422 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms