Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Smn1P97801 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smn1P97801 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Gm15321-201ENSMUST00000121290 288 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Gm14719-201ENSMUST00000121891 340 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.83□□□□□ -0.68
Smn1P97801 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.83□□□□□ -0.68
Smn1P97801 Gm42612-201ENSMUST00000197986 623 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Gm43170-201ENSMUST00000199827 612 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Gm44069-201ENSMUST00000204898 506 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.83□□□□□ -0.68
Smn1P97801 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Gm26035-201ENSMUST00000083065 308 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
Smn1P97801 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smn1P97801 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.83□□□□□ -0.68
Smn1P97801 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.82□□□□□ -0.68
Smn1P97801 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Gm22189-201ENSMUST00000103822 86 ntBASIC10.82□□□□□ -0.68
Smn1P97801 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Smn1P97801 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Mir7684-201ENSMUST00000183858 60 ntBASIC10.82□□□□□ -0.68
Smn1P97801 Mir8102-201ENSMUST00000184148 139 ntBASIC10.82□□□□□ -0.68
Smn1P97801 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.82□□□□□ -0.68
Smn1P97801 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 Itm2b-204ENSMUST00000228637 783 ntBASIC10.82□□□□□ -0.68
Smn1P97801 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.82□□□□□ -0.68
Smn1P97801 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Smn1P97801 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms