Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc1P97496 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.81■□□□□ 0.12
Smarcc1P97496 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Gm23251-201ENSMUST00000103773 110 ntBASIC15.81■□□□□ 0.12
Smarcc1P97496 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Gm13888-201ENSMUST00000119148 422 ntBASIC15.81■□□□□ 0.12
Smarcc1P97496 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Gm7593-201ENSMUST00000187246 644 ntBASIC15.81■□□□□ 0.12
Smarcc1P97496 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.81■□□□□ 0.12
Smarcc1P97496 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc1P97496 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.81■□□□□ 0.12
Smarcc1P97496 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.8■□□□□ 0.12
Smarcc1P97496 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smarcc1P97496 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.8■□□□□ 0.12
Smarcc1P97496 Gm12029-201ENSMUST00000120073 832 ntBASIC15.8■□□□□ 0.12
Smarcc1P97496 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.8■□□□□ 0.12
Smarcc1P97496 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smarcc1P97496 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcc1P97496 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcc1P97496 Gm1821-202ENSMUST00000227415 750 ntBASIC15.8■□□□□ 0.12
Smarcc1P97496 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smarcc1P97496 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smarcc1P97496 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcc1P97496 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc1P97496 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.79■□□□□ 0.12
Smarcc1P97496 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.79■□□□□ 0.12
Smarcc1P97496 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Gm43058-201ENSMUST00000197645 625 ntBASIC15.79■□□□□ 0.12
Smarcc1P97496 Gm18038-201ENSMUST00000197900 485 ntBASIC15.79■□□□□ 0.12
Smarcc1P97496 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcc1P97496 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.79■□□□□ 0.12
Smarcc1P97496 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Gm9996-201ENSMUST00000070359 913 ntBASIC15.79■□□□□ 0.12
Smarcc1P97496 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Gm21811-201ENSMUST00000096485 930 ntBASIC15.79■□□□□ 0.12
Smarcc1P97496 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc1P97496 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcc1P97496 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.78■□□□□ 0.12
Smarcc1P97496 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.78■□□□□ 0.12
Smarcc1P97496 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms