Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
PrkdcP97313 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC8.33□□□□□ -1.08
PrkdcP97313 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC8.33□□□□□ -1.08
PrkdcP97313 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PrkdcP97313 Gm5706-201ENSMUST00000181525 993 ntBASIC8.33□□□□□ -1.08
PrkdcP97313 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Gm43966-201ENSMUST00000203301 612 ntBASIC8.33□□□□□ -1.08
PrkdcP97313 AC169511.1-201ENSMUST00000227639 995 ntBASIC8.33□□□□□ -1.08
PrkdcP97313 AC121960.1-201ENSMUST00000227982 564 ntBASIC8.33□□□□□ -1.08
PrkdcP97313 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PrkdcP97313 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC8.33□□□□□ -1.08
PrkdcP97313 Gm14395-201ENSMUST00000120494 563 ntBASIC8.33□□□□□ -1.08
PrkdcP97313 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC8.33□□□□□ -1.08
PrkdcP97313 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC8.33□□□□□ -1.08
PrkdcP97313 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC8.33□□□□□ -1.08
PrkdcP97313 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 AC153152.3-201ENSMUST00000222188 1135 ntBASIC8.33□□□□□ -1.08
PrkdcP97313 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PrkdcP97313 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PrkdcP97313 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PrkdcP97313 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PrkdcP97313 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm8956-201ENSMUST00000203939 825 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm2448-201ENSMUST00000207080 559 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Gm38344-201ENSMUST00000195306 1353 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm37691-201ENSMUST00000192147 2573 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Gm15196-201ENSMUST00000121406 482 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Gm20493-201ENSMUST00000173706 213 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm45113-201ENSMUST00000207518 165 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 CT009546.1-201ENSMUST00000222573 1120 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 AC164618.2-201ENSMUST00000224770 573 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Gm5705-201ENSMUST00000066241 711 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm8968-201ENSMUST00000199133 1303 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
PrkdcP97313 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm23439-201ENSMUST00000104292 132 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 Mir8093-201ENSMUST00000185043 137 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Gm6450-201ENSMUST00000200896 574 ntBASIC8.32□□□□□ -1.08
PrkdcP97313 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
PrkdcP97313 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC8.32□□□□□ -1.08
PrkdcP97313 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PrkdcP97313 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PrkdcP97313 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PrkdcP97313 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms