Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.76□□□□□ -0.21
Trim43cP86449 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.76□□□□□ -0.21
Trim43cP86449 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trim43cP86449 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43cP86449 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Trim43cP86449 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim43cP86449 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43cP86449 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.75□□□□□ -0.21
Trim43cP86449 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Gm13492-201ENSMUST00000119772 665 ntBASIC13.75□□□□□ -0.21
Trim43cP86449 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim43cP86449 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim43cP86449 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim43cP86449 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim43cP86449 AY702102-202ENSMUST00000194651 1173 ntBASIC13.75□□□□□ -0.21
Trim43cP86449 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim43cP86449 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Gm5781-201ENSMUST00000219792 443 ntBASIC13.75□□□□□ -0.21
Trim43cP86449 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.75□□□□□ -0.21
Trim43cP86449 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim43cP86449 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43cP86449 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43cP86449 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43cP86449 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43cP86449 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim43cP86449 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim43cP86449 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Gm13315-201ENSMUST00000120376 991 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim43cP86449 Gm37008-201ENSMUST00000195712 319 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 Gm19184-201ENSMUST00000196798 928 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 Gm18054-201ENSMUST00000207539 555 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim43cP86449 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trim43cP86449 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Gm22058-201ENSMUST00000083393 310 ntBASIC13.74□□□□□ -0.21
Trim43cP86449 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim43cP86449 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43cP86449 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim43cP86449 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms