Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.71□□□□□ -0.22
CiitaP79621 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CiitaP79621 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CiitaP79621 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.7□□□□□ -0.22
CiitaP79621 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
CiitaP79621 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Gm24231-201ENSMUST00000104315 133 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CiitaP79621 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.7□□□□□ -0.22
CiitaP79621 Gm14832-201ENSMUST00000121289 322 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Gm14760-201ENSMUST00000121831 999 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Rmrp-201ENSMUST00000157463 271 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CiitaP79621 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.7□□□□□ -0.22
CiitaP79621 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Gm10076-201ENSMUST00000073238 384 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.7□□□□□ -0.22
CiitaP79621 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.7□□□□□ -0.22
CiitaP79621 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.7□□□□□ -0.22
CiitaP79621 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CiitaP79621 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CiitaP79621 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.69□□□□□ -0.22
CiitaP79621 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CiitaP79621 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Gm3096-201ENSMUST00000185770 364 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Gm18304-201ENSMUST00000189162 546 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.69□□□□□ -0.22
CiitaP79621 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Gm18056-201ENSMUST00000207670 568 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Gm18061-201ENSMUST00000208350 562 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Gm18063-201ENSMUST00000208529 568 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Gm18052-201ENSMUST00000208750 559 ntBASIC13.69□□□□□ -0.22
CiitaP79621 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CiitaP79621 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CiitaP79621 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CiitaP79621 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CiitaP79621 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.68□□□□□ -0.22
CiitaP79621 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CiitaP79621 Gm14109-201ENSMUST00000118814 309 ntBASIC13.68□□□□□ -0.22
CiitaP79621 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.68□□□□□ -0.22
CiitaP79621 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.68□□□□□ -0.22
CiitaP79621 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.68□□□□□ -0.22
CiitaP79621 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CiitaP79621 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Gm28882-201ENSMUST00000185504 314 ntBASIC13.68□□□□□ -0.22
CiitaP79621 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms