Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb1P63158 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Gm11803-201ENSMUST00000119966 444 ntBASIC13.96□□□□□ -0.17
Hmgb1P63158 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Gm17208-201ENSMUST00000168388 535 ntBASIC13.96□□□□□ -0.17
Hmgb1P63158 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.96□□□□□ -0.17
Hmgb1P63158 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.96□□□□□ -0.17
Hmgb1P63158 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.96□□□□□ -0.17
Hmgb1P63158 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hmgb1P63158 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.96□□□□□ -0.17
Hmgb1P63158 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb1P63158 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb1P63158 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb1P63158 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb1P63158 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb1P63158 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb1P63158 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb1P63158 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm6244-201ENSMUST00000178732 841 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm6745-201ENSMUST00000199216 526 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm5356-201ENSMUST00000093326 615 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Hmgb1P63158 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb1P63158 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms