Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.84□□□□□ -0.35
ThraP63058 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.84□□□□□ -0.35
ThraP63058 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
ThraP63058 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ThraP63058 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.84□□□□□ -0.35
ThraP63058 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ThraP63058 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
ThraP63058 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Gm27501-201ENSMUST00000183599 107 ntBASIC12.84□□□□□ -0.35
ThraP63058 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.84□□□□□ -0.35
ThraP63058 Gm43133-201ENSMUST00000197472 463 ntBASIC12.84□□□□□ -0.35
ThraP63058 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.84□□□□□ -0.35
ThraP63058 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ThraP63058 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.84□□□□□ -0.35
ThraP63058 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ThraP63058 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ThraP63058 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ThraP63058 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ThraP63058 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ThraP63058 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
ThraP63058 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.83□□□□□ -0.36
ThraP63058 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.83□□□□□ -0.36
ThraP63058 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Gm25927-201ENSMUST00000175058 117 ntBASIC12.83□□□□□ -0.36
ThraP63058 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Gm38266-201ENSMUST00000194931 421 ntBASIC12.83□□□□□ -0.36
ThraP63058 Gm42627-201ENSMUST00000197347 224 ntBASIC12.83□□□□□ -0.36
ThraP63058 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ThraP63058 Gm19931-201ENSMUST00000198920 368 ntBASIC12.83□□□□□ -0.36
ThraP63058 Gm43822-201ENSMUST00000200285 476 ntBASIC12.83□□□□□ -0.36
ThraP63058 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.83□□□□□ -0.36
ThraP63058 Gm3961-201ENSMUST00000204425 994 ntBASIC12.83□□□□□ -0.36
ThraP63058 Gm45930-201ENSMUST00000221330 292 ntBASIC12.83□□□□□ -0.36
ThraP63058 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ThraP63058 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ThraP63058 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
ThraP63058 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.82□□□□□ -0.36
ThraP63058 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ThraP63058 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.82□□□□□ -0.36
ThraP63058 Gm11793-201ENSMUST00000120433 981 ntBASIC12.82□□□□□ -0.36
ThraP63058 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.82□□□□□ -0.36
ThraP63058 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.82□□□□□ -0.36
ThraP63058 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
ThraP63058 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.82□□□□□ -0.36
ThraP63058 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.82□□□□□ -0.36
ThraP63058 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.82□□□□□ -0.36
ThraP63058 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.82□□□□□ -0.36
ThraP63058 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Gm27516-201ENSMUST00000184237 98 ntBASIC12.82□□□□□ -0.36
ThraP63058 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ThraP63058 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms