Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.01□□□□□ -0.97
Rpl39P62892 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm11524-201ENSMUST00000119349 807 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 Gm11594-201ENSMUST00000122313 162 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm24513-201ENSMUST00000174964 138 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm19184-201ENSMUST00000196798 928 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 Gm42550-201ENSMUST00000201553 960 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 Gm19078-201ENSMUST00000206311 727 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm7775-201ENSMUST00000218871 853 ntBASIC9.01□□□□□ -0.97
Rpl39P62892 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rpl39P62892 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.01□□□□□ -0.97
Rpl39P62892 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.01□□□□□ -0.97
Rpl39P62892 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rpl39P62892 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9□□□□□ -0.97
Rpl39P62892 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rpl39P62892 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Gm43727-201ENSMUST00000198021 2647 ntBASIC9□□□□□ -0.97
Rpl39P62892 Mir686-201ENSMUST00000102174 109 ntBASIC9□□□□□ -0.97
Rpl39P62892 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Rpl39P62892 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9□□□□□ -0.97
Rpl39P62892 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9□□□□□ -0.97
Rpl39P62892 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9□□□□□ -0.97
Rpl39P62892 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Gm38297-201ENSMUST00000195122 1057 ntBASIC9□□□□□ -0.97
Rpl39P62892 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9□□□□□ -0.97
Rpl39P62892 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9□□□□□ -0.97
Rpl39P62892 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms