Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Gm12363-201ENSMUST00000122250 668 ntBASIC12.93□□□□□ -0.34
Tubgcp3P58854 Gm7029-201ENSMUST00000173226 450 ntBASIC12.93□□□□□ -0.34
Tubgcp3P58854 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Gm4768-201ENSMUST00000206199 686 ntBASIC12.93□□□□□ -0.34
Tubgcp3P58854 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.93□□□□□ -0.34
Tubgcp3P58854 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tubgcp3P58854 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.92□□□□□ -0.34
Tubgcp3P58854 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.92□□□□□ -0.34
Tubgcp3P58854 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.92□□□□□ -0.34
Tubgcp3P58854 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubgcp3P58854 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.91□□□□□ -0.34
Tubgcp3P58854 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.91□□□□□ -0.34
Tubgcp3P58854 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Gm32025-201ENSMUST00000217960 307 ntBASIC12.91□□□□□ -0.34
Tubgcp3P58854 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.91□□□□□ -0.34
Tubgcp3P58854 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubgcp3P58854 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubgcp3P58854 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubgcp3P58854 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms