Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cdh11P55288 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm12742-201ENSMUST00000117326 410 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.56□□□□□ -0.56
Cdh11P55288 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm12403-201ENSMUST00000121384 959 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm6152-201ENSMUST00000151704 340 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Gm29608-201ENSMUST00000190444 463 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdh11P55288 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.56□□□□□ -0.56
Cdh11P55288 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cdh11P55288 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cdh11P55288 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.55□□□□□ -0.56
Cdh11P55288 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.55□□□□□ -0.56
Cdh11P55288 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdh11P55288 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cdh11P55288 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm29649-201ENSMUST00000185649 419 ntBASIC11.55□□□□□ -0.56
Cdh11P55288 Gm45784-201ENSMUST00000188360 142 ntBASIC11.55□□□□□ -0.56
Cdh11P55288 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.55□□□□□ -0.56
Cdh11P55288 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.55□□□□□ -0.56
Cdh11P55288 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdh11P55288 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.55□□□□□ -0.56
Cdh11P55288 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.55□□□□□ -0.56
Cdh11P55288 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.55□□□□□ -0.56
Cdh11P55288 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdh11P55288 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh11P55288 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms