Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Msh6P54276 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.95■□□□□ 0.14
Msh6P54276 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.95■□□□□ 0.14
Msh6P54276 Gm11450-201ENSMUST00000121144 333 ntBASIC15.95■□□□□ 0.14
Msh6P54276 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 Gm19353-201ENSMUST00000184561 445 ntBASIC15.95■□□□□ 0.14
Msh6P54276 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Gm19994-201ENSMUST00000217086 586 ntBASIC15.95■□□□□ 0.14
Msh6P54276 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.95■□□□□ 0.14
Msh6P54276 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.95■□□□□ 0.14
Msh6P54276 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Ntng1-201ENSMUST00000051253 327 ntBASIC15.95■□□□□ 0.14
Msh6P54276 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Msh6P54276 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.95■□□□□ 0.14
Msh6P54276 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Msh6P54276 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Msh6P54276 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Msh6P54276 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Msh6P54276 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Gm23949-201ENSMUST00000104027 127 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Msh6P54276 Gm29615-201ENSMUST00000185371 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm28224-201ENSMUST00000186078 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm29001-201ENSMUST00000186177 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm28292-201ENSMUST00000186593 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm28101-201ENSMUST00000187608 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm29076-201ENSMUST00000187689 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm28302-201ENSMUST00000187931 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm28646-201ENSMUST00000188220 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm28205-201ENSMUST00000189177 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm29032-201ENSMUST00000189797 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm28695-201ENSMUST00000190300 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm37448-201ENSMUST00000192795 697 ntBASIC15.94■□□□□ 0.14
Msh6P54276 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.94■□□□□ 0.14
Msh6P54276 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.94■□□□□ 0.14
Msh6P54276 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Msh6P54276 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Msh6P54276 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Msh6P54276 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Msh6P54276 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.93■□□□□ 0.14
Msh6P54276 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Gm15515-201ENSMUST00000117827 822 ntBASIC15.93■□□□□ 0.14
Msh6P54276 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.93■□□□□ 0.14
Msh6P54276 Gm18304-201ENSMUST00000189162 546 ntBASIC15.93■□□□□ 0.14
Msh6P54276 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.93■□□□□ 0.14
Msh6P54276 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Msh6P54276 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Gm10076-201ENSMUST00000073238 384 ntBASIC15.93■□□□□ 0.14
Msh6P54276 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh6P54276 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh6P54276 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Msh6P54276 Gm11628-201ENSMUST00000117568 171 ntBASIC15.92■□□□□ 0.14
Msh6P54276 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms