Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.81□□□□□ -0.36
Lhx3P50481 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx3P50481 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx3P50481 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.81□□□□□ -0.36
Lhx3P50481 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lhx3P50481 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.8□□□□□ -0.36
Lhx3P50481 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Gm23270-201ENSMUST00000104055 131 ntBASIC12.8□□□□□ -0.36
Lhx3P50481 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.8□□□□□ -0.36
Lhx3P50481 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Gm14726-201ENSMUST00000120623 896 ntBASIC12.8□□□□□ -0.36
Lhx3P50481 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.8□□□□□ -0.36
Lhx3P50481 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.8□□□□□ -0.36
Lhx3P50481 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lhx3P50481 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx3P50481 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx3P50481 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Lhx3P50481 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.79□□□□□ -0.36
Lhx3P50481 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.79□□□□□ -0.36
Lhx3P50481 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Lhx3P50481 Gm24845-201ENSMUST00000158034 109 ntBASIC12.79□□□□□ -0.36
Lhx3P50481 Gm23119-201ENSMUST00000158610 140 ntBASIC12.79□□□□□ -0.36
Lhx3P50481 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lhx3P50481 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.79□□□□□ -0.36
Lhx3P50481 Gm42937-201ENSMUST00000197360 752 ntBASIC12.79□□□□□ -0.36
Lhx3P50481 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lhx3P50481 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lhx3P50481 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Lhx3P50481 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.79□□□□□ -0.36
Lhx3P50481 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lhx3P50481 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx3P50481 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Lhx3P50481 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms