Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpdP50404 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpdP50404 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpdP50404 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpdP50404 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpdP50404 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpdP50404 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SftpdP50404 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SftpdP50404 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Gm12957-201ENSMUST00000117835 377 ntBASIC13.32□□□□□ -0.28
SftpdP50404 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.32□□□□□ -0.28
SftpdP50404 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.32□□□□□ -0.28
SftpdP50404 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.32□□□□□ -0.28
SftpdP50404 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.32□□□□□ -0.28
SftpdP50404 Gm19184-201ENSMUST00000196798 928 ntBASIC13.32□□□□□ -0.28
SftpdP50404 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.32□□□□□ -0.28
SftpdP50404 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Gm26035-201ENSMUST00000083065 308 ntBASIC13.32□□□□□ -0.28
SftpdP50404 Gm22058-201ENSMUST00000083393 310 ntBASIC13.32□□□□□ -0.28
SftpdP50404 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SftpdP50404 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SftpdP50404 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.32□□□□□ -0.28
SftpdP50404 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SftpdP50404 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.32□□□□□ -0.28
SftpdP50404 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpdP50404 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.32□□□□□ -0.28
SftpdP50404 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SftpdP50404 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SftpdP50404 Daam2-202ENSMUST00000224595 1926 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.31□□□□□ -0.28
SftpdP50404 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Gm8062-201ENSMUST00000139696 444 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.31□□□□□ -0.28
SftpdP50404 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.31□□□□□ -0.28
SftpdP50404 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.31□□□□□ -0.28
SftpdP50404 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.31□□□□□ -0.28
SftpdP50404 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.31□□□□□ -0.28
SftpdP50404 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.31□□□□□ -0.28
SftpdP50404 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.31□□□□□ -0.28
SftpdP50404 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.31□□□□□ -0.28
SftpdP50404 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpdP50404 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SftpdP50404 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SftpdP50404 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.3□□□□□ -0.28
SftpdP50404 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SftpdP50404 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.3□□□□□ -0.28
SftpdP50404 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.3□□□□□ -0.28
SftpdP50404 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpdP50404 Gm12742-201ENSMUST00000117326 410 ntBASIC13.3□□□□□ -0.28
SftpdP50404 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.3□□□□□ -0.28
SftpdP50404 Gm11964-201ENSMUST00000120982 444 ntBASIC13.3□□□□□ -0.28
SftpdP50404 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.3□□□□□ -0.28
SftpdP50404 Gm24548-201ENSMUST00000158650 108 ntBASIC13.3□□□□□ -0.28
SftpdP50404 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms