Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
GdnfP48540 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Gm12091-201ENSMUST00000146791 830 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Gm44124-201ENSMUST00000204159 472 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
GdnfP48540 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.12□□□□□ -0.63
GdnfP48540 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.12□□□□□ -0.63
GdnfP48540 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
GdnfP48540 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
GdnfP48540 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.11□□□□□ -0.63
GdnfP48540 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.11□□□□□ -0.63
GdnfP48540 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.11□□□□□ -0.63
GdnfP48540 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.11□□□□□ -0.63
GdnfP48540 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.11□□□□□ -0.63
GdnfP48540 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.11□□□□□ -0.63
GdnfP48540 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.11□□□□□ -0.63
GdnfP48540 Gm42550-201ENSMUST00000201553 960 ntBASIC11.11□□□□□ -0.63
GdnfP48540 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.11□□□□□ -0.63
GdnfP48540 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.11□□□□□ -0.63
GdnfP48540 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.11□□□□□ -0.63
GdnfP48540 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.11□□□□□ -0.63
GdnfP48540 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.11□□□□□ -0.63
GdnfP48540 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
GdnfP48540 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.11□□□□□ -0.63
GdnfP48540 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.11□□□□□ -0.63
GdnfP48540 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
GdnfP48540 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.11□□□□□ -0.63
GdnfP48540 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
GdnfP48540 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
GdnfP48540 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.1□□□□□ -0.63
GdnfP48540 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
GdnfP48540 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms