Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Prox1P48437 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.17□□□□□ -0.46
Prox1P48437 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Gm11424-201ENSMUST00000121929 829 ntBASIC12.17□□□□□ -0.46
Prox1P48437 Gm15487-201ENSMUST00000122373 465 ntBASIC12.17□□□□□ -0.46
Prox1P48437 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Prox1P48437 Gm28760-201ENSMUST00000185995 736 ntBASIC12.17□□□□□ -0.46
Prox1P48437 Gm29667-201ENSMUST00000190817 490 ntBASIC12.17□□□□□ -0.46
Prox1P48437 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.17□□□□□ -0.46
Prox1P48437 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Prox1P48437 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.17□□□□□ -0.46
Prox1P48437 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.17□□□□□ -0.46
Prox1P48437 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.17□□□□□ -0.46
Prox1P48437 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prox1P48437 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.16□□□□□ -0.46
Prox1P48437 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.16□□□□□ -0.46
Prox1P48437 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.16□□□□□ -0.46
Prox1P48437 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prox1P48437 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.16□□□□□ -0.46
Prox1P48437 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prox1P48437 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Prox1P48437 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.15□□□□□ -0.46
Prox1P48437 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Prox1P48437 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Gm7488-201ENSMUST00000117148 684 ntBASIC12.15□□□□□ -0.46
Prox1P48437 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Prox1P48437 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms