Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl13P47963 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl13P47963 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl13P47963 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpl13P47963 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Rpl13P47963 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpl13P47963 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Gm12384-201ENSMUST00000119228 919 ntBASIC13.86□□□□□ -0.19
Rpl13P47963 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Rpl13P47963 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.86□□□□□ -0.19
Rpl13P47963 Gm16296-201ENSMUST00000159905 325 ntBASIC13.86□□□□□ -0.19
Rpl13P47963 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.86□□□□□ -0.19
Rpl13P47963 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.86□□□□□ -0.19
Rpl13P47963 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.86□□□□□ -0.19
Rpl13P47963 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rpl13P47963 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.86□□□□□ -0.19
Rpl13P47963 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.86□□□□□ -0.19
Rpl13P47963 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.86□□□□□ -0.19
Rpl13P47963 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpl13P47963 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl13P47963 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Rpl13P47963 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Rpl13P47963 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpl13P47963 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rpl13P47963 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.85□□□□□ -0.19
Rpl13P47963 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.85□□□□□ -0.19
Rpl13P47963 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.85□□□□□ -0.19
Rpl13P47963 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.85□□□□□ -0.19
Rpl13P47963 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.85□□□□□ -0.19
Rpl13P47963 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.85□□□□□ -0.19
Rpl13P47963 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpl13P47963 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rpl13P47963 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpl13P47963 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.85□□□□□ -0.19
Rpl13P47963 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.85□□□□□ -0.19
Rpl13P47963 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl13P47963 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpl13P47963 Gm13492-201ENSMUST00000119772 665 ntBASIC13.84□□□□□ -0.19
Rpl13P47963 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.84□□□□□ -0.19
Rpl13P47963 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.84□□□□□ -0.19
Rpl13P47963 Gm5745-201ENSMUST00000183748 313 ntBASIC13.84□□□□□ -0.19
Rpl13P47963 Gm6266-201ENSMUST00000203844 806 ntBASIC13.84□□□□□ -0.19
Rpl13P47963 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpl13P47963 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.84□□□□□ -0.19
Rpl13P47963 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpl13P47963 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpl13P47963 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl13P47963 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms