Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Daam2-202ENSMUST00000224595 1926 ntBASIC12.21□□□□□ -0.46
Tnfsf4P43488 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf4P43488 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm8213-201ENSMUST00000118191 441 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm10156-201ENSMUST00000122364 462 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm23363-201ENSMUST00000175024 79 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.2□□□□□ -0.46
Tnfsf4P43488 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf4P43488 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm37922-201ENSMUST00000195596 455 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm8099-201ENSMUST00000200510 742 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm7287-201ENSMUST00000205267 602 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms