Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Cdx2P43241 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdx2P43241 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12□□□□□ -0.49
Cdx2P43241 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Gm15515-201ENSMUST00000117827 822 ntBASIC12□□□□□ -0.49
Cdx2P43241 Gm15131-201ENSMUST00000119124 595 ntBASIC12□□□□□ -0.49
Cdx2P43241 Gm15432-201ENSMUST00000121106 195 ntBASIC12□□□□□ -0.49
Cdx2P43241 Rmrp-201ENSMUST00000157463 271 ntBASIC12□□□□□ -0.49
Cdx2P43241 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdx2P43241 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12□□□□□ -0.49
Cdx2P43241 Gm44126-201ENSMUST00000204831 514 ntBASIC12□□□□□ -0.49
Cdx2P43241 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 AL732506.1-201ENSMUST00000226420 281 ntBASIC12□□□□□ -0.49
Cdx2P43241 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cdx2P43241 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdx2P43241 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12□□□□□ -0.49
Cdx2P43241 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdx2P43241 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdx2P43241 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdx2P43241 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdx2P43241 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdx2P43241 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdx2P43241 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Cdx2P43241 Gm19459-201ENSMUST00000176240 835 ntBASIC11.99□□□□□ -0.49
Cdx2P43241 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdx2P43241 Gm27438-201ENSMUST00000183480 110 ntBASIC11.99□□□□□ -0.49
Cdx2P43241 Gm19353-201ENSMUST00000184561 445 ntBASIC11.99□□□□□ -0.49
Cdx2P43241 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdx2P43241 Gm5369-201ENSMUST00000217499 588 ntBASIC11.99□□□□□ -0.49
Cdx2P43241 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Cdx2P43241 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdx2P43241 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdx2P43241 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdx2P43241 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdx2P43241 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdx2P43241 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdx2P43241 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms