Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
HttP42859 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.05□□□□□ -0.32
HttP42859 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Gm14892-201ENSMUST00000117636 267 ntBASIC13.05□□□□□ -0.32
HttP42859 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.05□□□□□ -0.32
HttP42859 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.05□□□□□ -0.32
HttP42859 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
HttP42859 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.05□□□□□ -0.32
HttP42859 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Gm13117-201ENSMUST00000120894 691 ntBASIC13.04□□□□□ -0.32
HttP42859 Gm22379-201ENSMUST00000157480 131 ntBASIC13.04□□□□□ -0.32
HttP42859 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.04□□□□□ -0.32
HttP42859 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
HttP42859 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HttP42859 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.04□□□□□ -0.32
HttP42859 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HttP42859 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.04□□□□□ -0.32
HttP42859 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.04□□□□□ -0.32
HttP42859 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
HttP42859 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Gm24078-201ENSMUST00000158184 103 ntBASIC13.04□□□□□ -0.32
HttP42859 Gm37981-201ENSMUST00000194280 535 ntBASIC13.04□□□□□ -0.32
HttP42859 Gm45113-201ENSMUST00000207518 165 ntBASIC13.04□□□□□ -0.32
HttP42859 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HttP42859 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HttP42859 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.04□□□□□ -0.32
HttP42859 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Gm14807-201ENSMUST00000116640 983 ntBASIC13.04□□□□□ -0.32
HttP42859 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Gm4775-201ENSMUST00000169588 402 ntBASIC13.04□□□□□ -0.32
HttP42859 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.04□□□□□ -0.32
HttP42859 Gm7082-201ENSMUST00000209880 969 ntBASIC13.04□□□□□ -0.32
HttP42859 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.04□□□□□ -0.32
HttP42859 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HttP42859 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
HttP42859 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.03□□□□□ -0.32
HttP42859 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.03□□□□□ -0.32
HttP42859 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.03□□□□□ -0.32
HttP42859 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HttP42859 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Gm13981-201ENSMUST00000122360 447 ntBASIC13.03□□□□□ -0.32
HttP42859 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.03□□□□□ -0.32
HttP42859 Gm30671-201ENSMUST00000214898 318 ntBASIC13.03□□□□□ -0.32
HttP42859 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HttP42859 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.03□□□□□ -0.32
HttP42859 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.03□□□□□ -0.32
HttP42859 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Gm5419-201ENSMUST00000119301 527 ntBASIC13.03□□□□□ -0.32
HttP42859 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.03□□□□□ -0.32
HttP42859 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HttP42859 Gm29304-201ENSMUST00000186555 695 ntBASIC13.03□□□□□ -0.32
HttP42859 Gm29223-201ENSMUST00000188867 695 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms