Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Gm16167-201ENSMUST00000160428 1065 ntBASIC18.52■□□□□ 0.56
Chd1P40201 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC18.52■□□□□ 0.56
Chd1P40201 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Gm10807-201ENSMUST00000177134 795 ntBASIC18.52■□□□□ 0.56
Chd1P40201 Gm24954-201ENSMUST00000178831 110 ntBASIC18.52■□□□□ 0.56
Chd1P40201 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC18.52■□□□□ 0.56
Chd1P40201 Gm43969-201ENSMUST00000204833 535 ntBASIC18.52■□□□□ 0.56
Chd1P40201 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC18.52■□□□□ 0.56
Chd1P40201 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd1P40201 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chd1P40201 Gm13445-201ENSMUST00000121664 307 ntBASIC18.52■□□□□ 0.55
Chd1P40201 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC18.52■□□□□ 0.55
Chd1P40201 Gm43671-201ENSMUST00000200422 433 ntBASIC18.52■□□□□ 0.55
Chd1P40201 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chd1P40201 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Gm23912-201ENSMUST00000104687 87 ntBASIC18.51■□□□□ 0.55
Chd1P40201 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd1P40201 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC18.51■□□□□ 0.55
Chd1P40201 Gm11783-201ENSMUST00000119549 885 ntBASIC18.51■□□□□ 0.55
Chd1P40201 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Gm8459-201ENSMUST00000162504 760 ntBASIC18.51■□□□□ 0.55
Chd1P40201 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Chd1P40201 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chd1P40201 Gm6644-201ENSMUST00000186507 951 ntBASIC18.51■□□□□ 0.55
Chd1P40201 Gm8197-202ENSMUST00000193422 934 ntBASIC18.51■□□□□ 0.55
Chd1P40201 Gm2448-201ENSMUST00000207080 559 ntBASIC18.51■□□□□ 0.55
Chd1P40201 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd1P40201 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd1P40201 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chd1P40201 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1P40201 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Gm42840-201ENSMUST00000200303 2251 ntBASIC18.5■□□□□ 0.55
Chd1P40201 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC18.5■□□□□ 0.55
Chd1P40201 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Gm11957-201ENSMUST00000118304 779 ntBASIC18.5■□□□□ 0.55
Chd1P40201 Gm14270-201ENSMUST00000118388 846 ntBASIC18.5■□□□□ 0.55
Chd1P40201 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC18.5■□□□□ 0.55
Chd1P40201 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd1P40201 Gm7985-201ENSMUST00000183329 981 ntBASIC18.5■□□□□ 0.55
Chd1P40201 Gm6210-201ENSMUST00000204734 1942 ntBASIC18.5■□□□□ 0.55
Chd1P40201 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC18.5■□□□□ 0.55
Chd1P40201 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1P40201 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd1P40201 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.49■□□□□ 0.55
Chd1P40201 Gm23255-201ENSMUST00000102244 110 ntBASIC18.49■□□□□ 0.55
Chd1P40201 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC18.49■□□□□ 0.55
Chd1P40201 Gm11942-201ENSMUST00000180255 345 ntBASIC18.49■□□□□ 0.55
Chd1P40201 Gm37638-201ENSMUST00000194337 1123 ntBASIC18.49■□□□□ 0.55
Chd1P40201 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC18.49■□□□□ 0.55
Chd1P40201 Gm44913-201ENSMUST00000208060 2990 ntBASIC18.49■□□□□ 0.55
Chd1P40201 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC18.49■□□□□ 0.55
Chd1P40201 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC18.49■□□□□ 0.55
Chd1P40201 CT010506.1-201ENSMUST00000223673 349 ntBASIC18.49■□□□□ 0.55
Chd1P40201 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chd1P40201 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC18.49■□□□□ 0.55
Chd1P40201 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1P40201 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms