Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.09□□□□□ -0.63
Upk2P38575 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.09□□□□□ -0.63
Upk2P38575 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk2P38575 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.09□□□□□ -0.63
Upk2P38575 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.09□□□□□ -0.63
Upk2P38575 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.09□□□□□ -0.63
Upk2P38575 Gm18584-201ENSMUST00000203098 964 ntBASIC11.09□□□□□ -0.63
Upk2P38575 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.09□□□□□ -0.63
Upk2P38575 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk2P38575 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.09□□□□□ -0.63
Upk2P38575 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Upk2P38575 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk2P38575 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk2P38575 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.09□□□□□ -0.63
Upk2P38575 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.09□□□□□ -0.63
Upk2P38575 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Upk2P38575 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Upk2P38575 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Upk2P38575 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.08□□□□□ -0.64
Upk2P38575 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Gm24231-201ENSMUST00000104315 133 ntBASIC11.08□□□□□ -0.64
Upk2P38575 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.08□□□□□ -0.64
Upk2P38575 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.08□□□□□ -0.64
Upk2P38575 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.08□□□□□ -0.64
Upk2P38575 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Upk2P38575 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Upk2P38575 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Upk2P38575 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk2P38575 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Upk2P38575 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms