Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Thbs1P35441 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Thbs1P35441 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Thbs1P35441 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm11425-201ENSMUST00000119608 498 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.76□□□□□ -0.53
Thbs1P35441 Mir1982-201ENSMUST00000157368 74 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC11.76□□□□□ -0.53
Thbs1P35441 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm43037-201ENSMUST00000196808 250 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Gm44124-201ENSMUST00000204159 472 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm9396-201ENSMUST00000076703 567 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Thbs1P35441 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.76□□□□□ -0.53
Thbs1P35441 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Thbs1P35441 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Thbs1P35441 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs1P35441 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.75□□□□□ -0.53
Thbs1P35441 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.75□□□□□ -0.53
Thbs1P35441 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.75□□□□□ -0.53
Thbs1P35441 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.75□□□□□ -0.53
Thbs1P35441 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.75□□□□□ -0.53
Thbs1P35441 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.75□□□□□ -0.53
Thbs1P35441 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm19163-201ENSMUST00000223313 780 ntBASIC11.75□□□□□ -0.53
Thbs1P35441 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.75□□□□□ -0.53
Thbs1P35441 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.75□□□□□ -0.53
Thbs1P35441 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Thbs1P35441 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.75□□□□□ -0.53
Thbs1P35441 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.75□□□□□ -0.53
Thbs1P35441 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Thbs1P35441 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs1P35441 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.74□□□□□ -0.53
Thbs1P35441 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms