Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Gm13813-201ENSMUST00000120998 787 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 Gm24644-201ENSMUST00000157114 139 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 Gm22331-201ENSMUST00000158066 136 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 Gm24196-201ENSMUST00000179161 110 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.96□□□□□ -0.33
Mmp13P33435 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.96□□□□□ -0.33
Mmp13P33435 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.96□□□□□ -0.33
Mmp13P33435 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.96□□□□□ -0.33
Mmp13P33435 Gm7561-201ENSMUST00000211203 886 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 Gm6458-201ENSMUST00000211573 635 ntBASIC12.96□□□□□ -0.33
Mmp13P33435 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Mmp13P33435 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Mmp13P33435 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.96□□□□□ -0.34
Mmp13P33435 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp13P33435 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.96□□□□□ -0.34
Mmp13P33435 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Mmp13P33435 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Mmp13P33435 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Mmp13P33435 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Mmp13P33435 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Mmp13P33435 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Mmp13P33435 Gm16202-201ENSMUST00000117532 544 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Gm8213-201ENSMUST00000118191 441 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.95□□□□□ -0.34
Mmp13P33435 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.95□□□□□ -0.34
Mmp13P33435 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Gm44069-201ENSMUST00000204898 506 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Gm8598-201ENSMUST00000221184 836 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Gm10012-201ENSMUST00000078252 192 ntBASIC12.95□□□□□ -0.34
Mmp13P33435 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp13P33435 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.94□□□□□ -0.34
Mmp13P33435 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Daam2-202ENSMUST00000224595 1926 ntBASIC12.94□□□□□ -0.34
Mmp13P33435 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.94□□□□□ -0.34
Mmp13P33435 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Mmp13P33435 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.94□□□□□ -0.34
Mmp13P33435 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.94□□□□□ -0.34
Mmp13P33435 Proscos-202ENSMUST00000178990 666 ntBASIC12.94□□□□□ -0.34
Mmp13P33435 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.94□□□□□ -0.34
Mmp13P33435 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.94□□□□□ -0.34
Mmp13P33435 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.94□□□□□ -0.34
Mmp13P33435 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms