Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.9□□□□□ -0.66
Slc6a1P31648 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc6a1P31648 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.9□□□□□ -0.66
Slc6a1P31648 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm44855-201ENSMUST00000205725 362 ntBASIC10.9□□□□□ -0.66
Slc6a1P31648 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm19220-201ENSMUST00000222682 803 ntBASIC10.9□□□□□ -0.66
Slc6a1P31648 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.9□□□□□ -0.66
Slc6a1P31648 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.9□□□□□ -0.66
Slc6a1P31648 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.9□□□□□ -0.66
Slc6a1P31648 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc6a1P31648 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a1P31648 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Slc6a1P31648 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Slc6a1P31648 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Slc6a1P31648 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Slc6a1P31648 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Slc6a1P31648 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Slc6a1P31648 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.67
Slc6a1P31648 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.89□□□□□ -0.67
Slc6a1P31648 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Slc6a1P31648 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm29667-201ENSMUST00000190817 490 ntBASIC10.89□□□□□ -0.67
Slc6a1P31648 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.89□□□□□ -0.67
Slc6a1P31648 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm8227-201ENSMUST00000223306 571 ntBASIC10.89□□□□□ -0.67
Slc6a1P31648 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc6a1P31648 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms