Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mmp3P28862 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.52□□□□□ -0.25
Mmp3P28862 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.52□□□□□ -0.25
Mmp3P28862 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Mmp3P28862 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.52□□□□□ -0.25
Mmp3P28862 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Gm8913-201ENSMUST00000209491 641 ntBASIC13.52□□□□□ -0.25
Mmp3P28862 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Gm8385-201ENSMUST00000058999 643 ntBASIC13.52□□□□□ -0.25
Mmp3P28862 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Mmp3P28862 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Mmp3P28862 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.52□□□□□ -0.25
Mmp3P28862 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.52□□□□□ -0.25
Mmp3P28862 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.52□□□□□ -0.25
Mmp3P28862 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.52□□□□□ -0.25
Mmp3P28862 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mmp3P28862 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Mmp3P28862 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.51□□□□□ -0.25
Mmp3P28862 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Gm24231-201ENSMUST00000104315 133 ntBASIC13.51□□□□□ -0.25
Mmp3P28862 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Mmp3P28862 Gm7857-201ENSMUST00000117957 358 ntBASIC13.51□□□□□ -0.25
Mmp3P28862 Gm12217-201ENSMUST00000118858 696 ntBASIC13.51□□□□□ -0.25
Mmp3P28862 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.51□□□□□ -0.25
Mmp3P28862 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Mmp3P28862 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.51□□□□□ -0.25
Mmp3P28862 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.51□□□□□ -0.25
Mmp3P28862 Gm18304-201ENSMUST00000189162 546 ntBASIC13.51□□□□□ -0.25
Mmp3P28862 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.51□□□□□ -0.25
Mmp3P28862 Gm45598-202ENSMUST00000210719 986 ntBASIC13.51□□□□□ -0.25
Mmp3P28862 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.51□□□□□ -0.25
Mmp3P28862 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Mmp3P28862 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.51□□□□□ -0.25
Mmp3P28862 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Mmp3P28862 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Mmp3P28862 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp3P28862 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp3P28862 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.5□□□□□ -0.25
Mmp3P28862 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Mmp3P28862 Gm4909-201ENSMUST00000118749 794 ntBASIC13.5□□□□□ -0.25
Mmp3P28862 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.5□□□□□ -0.25
Mmp3P28862 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Gm9022-201ENSMUST00000182482 992 ntBASIC13.5□□□□□ -0.25
Mmp3P28862 Gm32999-201ENSMUST00000192693 562 ntBASIC13.5□□□□□ -0.25
Mmp3P28862 Gm18753-201ENSMUST00000201000 566 ntBASIC13.5□□□□□ -0.25
Mmp3P28862 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms