Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H2afxP27661 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.17□□□□□ -0.3
H2afxP27661 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.17□□□□□ -0.3
H2afxP27661 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
H2afxP27661 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.17□□□□□ -0.3
H2afxP27661 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
H2afxP27661 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
H2afxP27661 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Gm18889-201ENSMUST00000174284 929 ntBASIC13.17□□□□□ -0.3
H2afxP27661 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Gm28630-201ENSMUST00000187806 498 ntBASIC13.17□□□□□ -0.3
H2afxP27661 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Gm46209-201ENSMUST00000217912 553 ntBASIC13.17□□□□□ -0.3
H2afxP27661 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.17□□□□□ -0.3
H2afxP27661 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afxP27661 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
H2afxP27661 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
H2afxP27661 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
H2afxP27661 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.16□□□□□ -0.3
H2afxP27661 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afxP27661 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.16□□□□□ -0.3
H2afxP27661 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.16□□□□□ -0.3
H2afxP27661 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.16□□□□□ -0.3
H2afxP27661 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.16□□□□□ -0.3
H2afxP27661 Gm25927-201ENSMUST00000175058 117 ntBASIC13.16□□□□□ -0.3
H2afxP27661 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H2afxP27661 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afxP27661 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
H2afxP27661 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
H2afxP27661 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.16□□□□□ -0.3
H2afxP27661 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afxP27661 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afxP27661 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.15□□□□□ -0.3
H2afxP27661 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.15□□□□□ -0.3
H2afxP27661 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.15□□□□□ -0.3
H2afxP27661 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.15□□□□□ -0.3
H2afxP27661 Gm9466-201ENSMUST00000218144 2246 ntBASIC13.15□□□□□ -0.3
H2afxP27661 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
H2afxP27661 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.15□□□□□ -0.3
H2afxP27661 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
H2afxP27661 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
H2afxP27661 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.15□□□□□ -0.3
H2afxP27661 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.15□□□□□ -0.3
H2afxP27661 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.15□□□□□ -0.3
H2afxP27661 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.15□□□□□ -0.3
H2afxP27661 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.15□□□□□ -0.3
H2afxP27661 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afxP27661 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms