Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gm24548-201ENSMUST00000158650 108 ntBASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gm22058-201ENSMUST00000083393 310 ntBASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf1bP25119 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Gm7399-201ENSMUST00000032395 858 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Daam2-202ENSMUST00000224595 1926 ntBASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf1bP25119 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tnfrsf1bP25119 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms