Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BdnfP21237 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.16□□□□□ -0.46
BdnfP21237 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.16□□□□□ -0.46
BdnfP21237 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.16□□□□□ -0.46
BdnfP21237 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.16□□□□□ -0.46
BdnfP21237 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.16□□□□□ -0.46
BdnfP21237 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.16□□□□□ -0.46
BdnfP21237 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.16□□□□□ -0.46
BdnfP21237 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Gm15823-201ENSMUST00000064305 670 ntBASIC12.16□□□□□ -0.46
BdnfP21237 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
BdnfP21237 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.16□□□□□ -0.46
BdnfP21237 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
BdnfP21237 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BdnfP21237 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.15□□□□□ -0.46
BdnfP21237 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Gm5687-201ENSMUST00000118252 640 ntBASIC12.15□□□□□ -0.46
BdnfP21237 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.15□□□□□ -0.46
BdnfP21237 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.15□□□□□ -0.46
BdnfP21237 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.15□□□□□ -0.46
BdnfP21237 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.15□□□□□ -0.46
BdnfP21237 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 Gm45668-201ENSMUST00000211271 493 ntBASIC12.15□□□□□ -0.46
BdnfP21237 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.15□□□□□ -0.46
BdnfP21237 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.15□□□□□ -0.46
BdnfP21237 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
BdnfP21237 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.15□□□□□ -0.46
BdnfP21237 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
BdnfP21237 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BdnfP21237 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.15□□□□□ -0.47
BdnfP21237 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
BdnfP21237 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
BdnfP21237 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
BdnfP21237 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
BdnfP21237 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
BdnfP21237 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
BdnfP21237 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms