Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccl3P10855 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccl3P10855 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.15□□□□□ -0.62
Ccl3P10855 Gm45770-201ENSMUST00000212105 616 ntBASIC11.15□□□□□ -0.62
Ccl3P10855 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ccl3P10855 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Ccl3P10855 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.15□□□□□ -0.62
Ccl3P10855 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl3P10855 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl3P10855 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl3P10855 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl3P10855 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl3P10855 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl3P10855 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl3P10855 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Ccl3P10855 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.14□□□□□ -0.63
Ccl3P10855 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Gm13408-201ENSMUST00000119822 798 ntBASIC11.14□□□□□ -0.63
Ccl3P10855 Gm13935-201ENSMUST00000121859 798 ntBASIC11.14□□□□□ -0.63
Ccl3P10855 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.14□□□□□ -0.63
Ccl3P10855 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.14□□□□□ -0.63
Ccl3P10855 Gm5369-201ENSMUST00000217499 588 ntBASIC11.14□□□□□ -0.63
Ccl3P10855 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.14□□□□□ -0.63
Ccl3P10855 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.14□□□□□ -0.63
Ccl3P10855 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccl3P10855 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccl3P10855 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccl3P10855 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl3P10855 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl3P10855 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.13□□□□□ -0.63
Ccl3P10855 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Ccl3P10855 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Ccl3P10855 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Gm11989-201ENSMUST00000117240 672 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 Gm15515-201ENSMUST00000117827 822 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 Gm11362-201ENSMUST00000118838 850 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccl3P10855 Gm18304-201ENSMUST00000189162 546 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 Gm19994-201ENSMUST00000217086 586 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms