Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm18055-201ENSMUST00000208254 547 ntBASIC11.03□□□□□ -0.64
PtcraP0C6B2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.03□□□□□ -0.64
PtcraP0C6B2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
PtcraP0C6B2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
PtcraP0C6B2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PtcraP0C6B2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm11425-201ENSMUST00000119608 498 ntBASIC11.02□□□□□ -0.65
PtcraP0C6B2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm7809-201ENSMUST00000153199 742 ntBASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.02□□□□□ -0.65
PtcraP0C6B2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm9396-201ENSMUST00000076703 567 ntBASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.02□□□□□ -0.65
PtcraP0C6B2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.02□□□□□ -0.65
PtcraP0C6B2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PtcraP0C6B2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.01□□□□□ -0.65
PtcraP0C6B2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.01□□□□□ -0.65
PtcraP0C6B2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
PtcraP0C6B2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms